binding site
binding site
Noun
pl: binding sites
This term is a technical compound noun used almost exclusively in biochemistry, molecular biology, and pharmacology. It describes a precise spatial arrangement of amino acids or nucleotides that creates a chemical environment suitable for a specific partner molecule. The connotation is one of high specificity, often compared to a lock-and-key mechanism.
In professional scientific literature, the term is used to discuss affinity and selectivity. It is distinct from a "catalytic site," which is the specific location where a chemical reaction occurs; while a binding site holds the molecule in place, the catalytic site performs the actual transformation.
Meanings
Related Words
active siteaffinityligandproteinenzymereceptorsubstratecomplexinteractionmoleculebondhydrogen bondionic bondcovalent bondconformationallosteryallosteric sitecatalysiscatalystactivation energyinhibitoragonistantagonistcompetitive inhibitionnoncompetitive inhibitionspecificityselectivitystereo-specificitypocketcleftgroovedomainmotifresidueamino acidpeptidepolypeptidefoldingdenaturationequilibriumdissociation constantthermodynamicsentropyenthalpykineticssaturationoccupancycooperativityinduced fitlock and keybiochemistrymolecular biologypharmacologypharmacokineticspharmacodynamicssignal transductionhormoneneurotransmitterantibodyantigenepitopeparatopenucleotidetranscription factorpromoteroperatorcofactorcoenzymehydrophobicityhydrophilicityelectrostaticssteric hindrance